BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B06SP1|AL426473
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig126 1615 0.0
>3x_Contig126
Length = 1112
Score = 1615 bits (814), Expect = 0.0
Identities = 844/852 (99%), Gaps = 2/852 (0%)
Strand = Plus / Minus
Query: 1 aaacttgattaatactgctggaaagactacgtatgtttttatatttaaagaaaaacctaa 60
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 873 aaacttgattaaaactgctggaaagactacgtatggggttatatttaaagaaaaacctaa 814
Query: 61 ctgttaaaaaacacaagattagcgacgatctagtctgtagtgatattgcaactgattaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ctgttaaaaaacacaagattagcgacgatctagtctgtagtgatattgcaactgattaga 754
Query: 121 ttcgttacccattgcatttggagtatcaagttctgatgatgcatcgctgtcatgagagat 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ttcgttacacattgcatttggagtatcaagttctgatgatgcatcgctgtcatgagagat 694
Query: 181 agaatgggaaaatatcgataatttaggatctatttcatattgattatgaggatcatagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 agaatgggaaaatatcgataatttaggatctatttcatattgattatgaggatcatagtt 634
Query: 241 cttcatgtttctttcatggggtaacgtataatcaatttcaaattgtgatggggaacttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cttcatgtttctttcatggggtaacgtataatcaatttcaaattgtgatggggaacttgg 574
Query: 301 ggagtccatcttttcggaataatcggacattgtcacgacaccatcagatgagctaccgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ggagtccatcttttcggaataatcggacattgtcacgacaccatcagatgagctaccgca 514
Query: 361 atagaattgggcgtaattgtcctgctgttgagggttgttaggtagaatcttttcagtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atagaattgggcgtaattgtcctgctgttgagggttgttaggtagaatcttttcagtgat 454
Query: 421 tttaccgacgcgcgtatccttgtgcttgattctccaatccgtaatagaatcaatcactac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tttaccgacgcgcgtatccttgtgcttgattctccaatccgtaatagaatcaatcactac 394
Query: 481 accaagtccgatggttctgaggaagtttgcatacatgtttaatgcatcagatccaagtcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 accaagtccgatggttctgaggaagtttgcatacatgtttaatgcatcagatccaagtcc 334
Query: 541 gaatattaagaataccaggtaggacataactatgtacagccatacactgtacaatggttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaatattaagaataccaggtaggacataactatgtacagccatacactgtacaatggttg 274
Query: 601 accaggatcgaratgtaatatcacgttccataaagcactattgtgcgtnttctttgaagc 660
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 273 accaggatcgaaatgtaatatcacgttccataaagcactattgtgcgt-ttctttgaagc 215
Query: 661 tataatgacggtacgtggnggctgacgttcttcaagtccgaaacgaatgaatacatagag 720
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tataatgacggtacgtgg-ggctgacgttcttcaagtccgaaacgaatgaatacatagag 156
Query: 721 aacggaaacatgatcaggatgataaccatacaaaagattagtaatctcgaaaagcgtgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aacggaaacatgatcaggatgataaccatacaaaagattagtaatctcgaaaagcgtgat 96
Query: 781 atgttcaatcctgagttggtgcaatgcaaaatatccctgacatctttacgcttcttgtaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgttcaatcctgagttggtgcaatgcaaaatatccctgacatctttacgcttcttgtaa 36
Query: 841 aatacgaaaagt 852
||||||||||||
Sbjct: 35 aatacgaaaagt 24
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5924
Number of Sequences: 1807
Number of extensions: 5924
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)